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Browsing by Author "Kotut, Kiplagat"

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Amino acid neurotoxins in feathers of the Lesser Flamingo, Phoeniconaias minor
(Elsevier, 2013-01) Metcalf, J.S.; Banack, S.A.; Kotut, Kiplagat; Krienitz, L.; Codd, G.A.
The Lesser Flamingo (Phoeniconaias minor) is known to use cyanobacteria (primarily Arthrospira) as a major food source in the East African Rift Valley lakes. Periodically, mass mortalities have occurred, associated with the cyanobacterial toxins (cyanotoxins), microcystins and anatoxin-a. Deposition of these cyanotoxins into P. minor feathers has been shown to occur, consistent with the presence of cyanotoxins in the livers, stomach and faecal contents after dietary intake. As cyanobacteria have been shown to also produce the neurotoxins β-N-methylamino-L-alanine (BMAA) and 2,4-diaminobutyric acid (DAB), stored wing feathers, previously recovered from flamingos which had been exposed to microcystins and anatoxin-a and had subsequently died, were analysed for these neurotoxic amino acids. Trace amounts of BMAA were detected in extracts from Lake Nakuru flamingo feathers, with DAB also present at concentrations between 3.5 and 8.5 μg g(-1) dry weight in feathers from both lakes. Toxin recovery by solid-phase extraction of feather digests was tested with spiked deuterated BMAA and showed good recovery when analysed by LC-MS/MS (80-94%). This is the first report of these neurotoxic amino acids in birds. We discuss the origin and significance of DAB, alongside other cyanotoxins of dietary origin, in the feathers of the Lesser Flamingo.
Analysis of the cyanotoxins anatoxin-a and microcystins in Lesser Flamingo feathers.
(Taylor & Francis, 2006) Metcalf, J.S.; Morrison, L.F.; Krienitz, L.; Ballot, A.; Krause, E.; Kotut, Kiplagat; Pütz, S.; Wiegand, C.; Pflugmacher, S.; Codd, G.A.
Feathers from carcasses of the Lesser Flamingo (Phoeniconaias minor), which had died after ingesting cyanobacterial toxins (cyanotoxins) contained between 0.02 and 30.0 µg microcystin-LR equivalents per gram of feather according to HPLC and ELISA analysis of feather extracts. Anatoxin-a was detected less frequently in the Lesser Flamingo feathers, up to 0.8 µg anatoxin-a per gram of feather being recorded. When feathers from different body regions were analysed and compared for microcystins and anatoxin-a, wing feathers were found to contain the highest concentrations of these cyanotoxins, the order of concentration and frequency of analytical detection being wing > breast > head. Consistent with the presence of the microcystins and anatoxin-a in gut contents and the livers of the dead birds and negligible in vitro adsorption to feathers, the cyanotoxins associated with the feathers of the dead wild flamingos are inferred to be primarily of dietary origin
Behavioural Patterns and Responses to Human Disturbances of Wild Somali Ostriches (Struthio molybdophanes) in Samburu, Kenya.
(2016-08) Mutiga, Mariciano Iguna; Muoria, Paul Kimata; Kotut, Kiplagat; Karuri, Hannah W.
Somali ostrich has suffered a drastic decline in its population and range mainly due to hunting over the years for meat, skin and feathers. Urgent conservation measures should therefore be taken to reverse this trend particularly in their current population stronghold, the Samburu landscape. In this range, the magnitude and consequences of human disturbance on the ostrich has not been established. The aim of this study was therefore to investigate the behavioural patterns and assess the impacts of human disturbance to the bird. Focal animal sampling was used to establish ostrich‟s behavioural activity budget while the magnitude of human disturbance was assessed by determining and comparing flight initiation distances in the protected and partially protected areas. Somali ostrich spent most of their diurnal time in feeding and moving, and are more sensitive to human disturbance in the protected areas than they are in the partially protected areas. The results of this study imply that the ratite does not differ in behavioural patterns from other extant ostrich species and human disturbance is not posing a significant threat to its survival within Samburu landscape. Further studies are recommended for better understanding of the conservation status of the newly published species.
Changes of phytoplankton communities in Lakes Naivasha and Oloidien, examples of degradation and salinization of lakes in the Kenyan Rift Valley
(Springer, 2009) Ballot, A.; Kotut, Kiplagat; Novelo, E.; Krienitz, L.
Increasing degradation of the water quality, caused by overuse and salinization, leads to considerable changes of the phytoplankton composition in Kenyan Rift Valley lakes. Exemplarily, the phytoplankton communities and biomasses of deteriorating freshwater Lake Naivasha and salinizing Lake Oloidien were studied between 2001 and 2005, accompanied by physico-chemical measurements (pH, total phosphorus and nitrogen, alkalinity, conductivity). Over the last three decades, the ecology of these two water basins has been subjected to dramatic changes, caused by excessive use of water and catchment area by man. In L. Naivasha a shift in the dominance of coccoid cyanobacteria towards dominance of Chlorophyceae (Botryococcus terribilis) was observed. Lake Oloidien exhibited a shift in the dominance of coccoid Chlorophyceae towards dominance of cyanobacteria (Arthrospira fusiformis, Anabaenopsis elenkinii). Phytoplankton findings and chemical data demonstrate that L. Naivasha has developed towards a eutrophic freshwater lake while L. Oloidien has progressed towards a hypereutrophic alkaline-saline lake.
A Comparison of the physico-chemical and bacteriological quality of greywater from water deficient households in Homabay Town and Githurai Estates in Kenya.
(Academic Journals, 2012) Ngángá, V.G.; Kariuki, F.W.; Kotut, Kiplagat
Greywater, the untreated household wastewater that has not been contaminated by toilet waste, has been touted as a reliable all year-round source of water, especially in water scarce areas. Although it is commonly reused in water scarce urban and peri-urban settlements in Kenya, information on its bacteriological and physico-chemical properties is generally limited. The present study sought to compare the physico-chemical and bacteriological quality of kitchen and laundry greywater from an urban (Githurai) and peri-urban settlement (Homabay). Compared to the source water, kitchen and laundry greywater at the two sites had higher electrical conductivity (EC) and salinity, depressed dissolved oxygen (DO) levels and a wide pH range. Although significant differences in EC, DO and salinity of greywater from kitchen and laundry were noted (P < 0.05), the two sites differed significantly only in DO (P = 0.002). Total coliforms (TC) and fecal coliforms (FC) were also higher in greywater than in source water. The greywater types differed in TC (P = 0.003) while the two sites differed in both TC and FC (P ≤ 0.03). High loads of TC and FC suggest possible fecal contamination of greywater. This coupled with the occasional presence of Salmonella, Shigella and Vibrio cholerae means that reuse of untreated greywater is not safe in both sites, and should be treated before use. Owing to the differences in the quality of the different types of greywater as well as the sites investigated, the design of greywater treatment technologies should consider both type and source.
Contribution of hot spring cyanobacteria to the mysterious deaths of Lesser Flamingos at Lake Bogoria, Kenya
(Elsevier, 2003-03-01) Krienitz, L.; Ballot, A.; Kotut, Kiplagat; Wiegand, C.; Pütz, S.; Metcalf, J.S.; Codd, G.A.; Pflugmacher, S.
Cyanobacterial mats at hot springs on the shore of the alkaline Lake Bogoria, Kenya, were investigated regarding species community and cyanobacterial toxin content. The hepatotoxins microcystin-LR, -RR, -LF and -YR, and the neurotoxin anatoxin-a were present. The mats were dominated by Phormidium terebriformis, Oscillatoria willei, Spirulina subsalsa and Synechococcus bigranulatus. The concentration of microcystins in mat samples, ranged from 221 to 845 microg microcystin-LR equivalents g(-1) DW of mat. Anatoxin-a concentrations ranged from 10 to 18 microg g(-1) DW of mat. A contribution of the cyanobacterial toxins from the hot spring mats to the mass mortalities of Lesser Flamingos is suggested by: (a), the presence of hot spring cyanobacterial cells and cell fragments, and high concentrations of the cyanobacterial hepato- and neurotoxins in flamingo stomach contents and faecal pellets; (b), observations of neurological signs of bird poisoning at the lake. Cyanobacterial toxins in stomach contents, intestine and fecal pellets were 0.196 microg g(-1) fresh weight (FW) for the microcystins and 4.34 microg g(-1) FW for anatoxin-a. Intoxication with cyanobacterial toxins could occur by uptake of detached cyanobacterial cells from the mats, as the flamingos need to drink fresh or brackish water, and to wash their feathers daily, which they do in the vicinity of the hot springs, where salinity is lower than in the main body of water of the lake.
Contribution of tixic cynobacteria to massive deaths of lesser flamingoes at saline-alkaline lakes of Kenya
(2003) Krienitz, L.; Ballot, A.; Casper, P.; Codd, G.A.; Kotut, Kiplagat; Metcalf, J.S.; Morrison, L.F.; Pflugmacher, S.; Wiegand, C.
A cyano-anomaly? Cyanobacterial toxins as contributors to Lesser Flamingo mass deaths
(2003-10) Codd, G.A.; Metcalf, J.S.; Morrison, L.F.; Krienitz, L.; Ballot, A.; Pflugmacher, S.; Wiegand, C.; Kotut, Kiplagat
In the present study, significative HAB’S bloom was confirmed in Matanchén Bay during Febrary 2003. The Raphidophice Fibrocapsa cf. japonica, Toriumi et Takano 1973 (=Chatonella japonica) has dominated (97%) red tide event occurring lately in coastal waters of Nayarit state, with high cell concentration of 4-6 millions of cells per liter of water. The duration of this bloom could not be determined exactly due to limiting sampling. There have been no reports of fish kills or human intoxication in the locality. This study represents the first survey on the distribution of Fibrocapsa cf. • Mexico japonica in the Mexican Pacific coast. The finding adds Raphidophyceans to the list of harmful algal blooms and toxin producers in Mexico.
Cyanobacteria and cyanobacterial toxins in the alkaline crater lakes Sonachi and Simbi, Kenya
(Elsevier, 2005-01) Ballot, A.; Krienitz, L.; Kotut, Kiplagat; Wiegand, C.; Pflugmacher, S.
The phytoplankton communities and the production of cyanobacterial toxins were investigated in two alkaline Kenyan crater lakes, Lake Sonachi and Lake Simbi. Lake Sonachi was mainly dominated by the cyanobacterium Arthrospira fusiformis, Lake Simbi by A. fusiformis and Anabaenopsis abijatae. The phytoplankton biomasses measured were high, reaching up to 3159 mg l−1 in L. Sonachi and up to 348 mg l−1 in L. Simbi. Using HPLC techniques, one structural variant of the hepatotoxin microcystin (microcystin-RR) was found in L. Sonachi and four variants (microcystin-LR, -RR, -LA and -YR) were identified in L. Simbi. The neurotoxin anatoxin-a was found in both lakes. To our knowledge this is the first evidence of cyanobacterial toxins in L. Sonachi and L. Simbi. Total microcystin concentrations varied from 1.6 to 12.0 μg microcystin-LR equivalents g−1 DW in L. Sonachi and from 19.7 to 39.0 μg microcystin-LR equivalents g−1 DW in L. Simbi. Anatoxin-a concentrations ranged from 0.5 to 2.0 μg g−1 DW in L. Sonachi and from 0 to 1.4 μg g−1 DW in L. Simbi. In a monocyanobacterial strain of A. fusiformis, isolated from L. Sonachi, microcystin-YR and anatoxin-a were produced. The concentrations found were 2.2 μg microcystin g−1 DW and 0.3 μg anatoxin-a g−1 DW. This is the first study showing A. fusiformis as producer of microcystins and anatoxin-a. Since A. fusiformis occurs in mass developments in both lakes, a health risk for wildlife can be expected.
Cyanobacterial diversity in the hot spring, pelagic and benthic habitats of a tropical soda lake
(2013-08) Dadheech, Pawan K.; Glockner, G.; Casper, P.; Kotut, Kiplagat; Mazzoni, C.J.; Mbedi, S.; Krienitz, L.
Hot springs and saline-alkaline lakes of East Africa are extreme habitats regarding temperature, or salinity and pH, respectively. This study examines whether divergent habitats of Lake Bogoria, Kenya, impacts cyanobacterial community structure. Samples from the hot springs, pelagic zone and sediment were analysed by light microscopy, multilocus 454-amplicons sequencing and metagenomics to compare the cyanobacterial diversity. Most of the phylogenetic lineages of Cyanobacteria occurred exclusively in the Bogoria hot springs suggesting a high degree of endemism. The prevalent phylotypes were mainly members of the Oscillatoriales (Leptolyngbya, Spirulina, Oscillatoria-like and Planktothricoides). The Chroococcales were represented by different clades of Synechococcus but not a single phylotype clustered with any of the lineages described earlier from different continents. In contrast, we found that the pelagic zone and the sediments were inhabited by only a few taxa, dominated by Arthrospira and Anabaenopsis. Arthrospira, the main food base of Lesser Flamingo, was detected in all three habitats by amplicons pyrosequencing, indicating its resilience and key role as a primary producer. Despite the close connection between the three habitats studied, the cyanobacterial communities in the hot springs and lake differed considerably, suggesting that they are unable to adapt to the extreme conditions of the neighbouring habitat.
Cyanotoxin-producing bloom of Anabaena flos-aquae, Anabaena discoidea and Microcystis aeruginosa (Cyanobacteria) in Nyanza Gulf of Lake Victoria, Kenya
(2002) Krienitz, L.; Ballot, A.; Wiegand, C.; Kotut, Kiplagat; Codd, G.A.; Pflugmacher, S.
A bloom of Anabaena flos-aquae, Anabaena discoidea and Microcystis aeruginosa, was characterized in Nyanza Gulf of Lake Victoria, near Kisumu, Kenya. According to classical literature data, A. discoidea was considered to be endemic to the Great Lakes of Africa. Its morphological characteristics are described and discussed in relation to A. flos-aquae. The two samples investigated contained the cyanobacterial toxins, microcystin-LR, -RR, -LA and -LF.
Desertifilum fontinale sp. nov. (Oscillatoriales, Cyanobacteria) from a warm spring in East Africa, based on conventional and molecular studies
(2014) Dadheech, Pawan K.; Mahmoud, Huda; Kotut, Kiplagat; Krienitz, L.
Desertifilum is a filamentous cyanobacterium of crusts and biofilms, recently described from the extreme hot and dry Thar Desert in north–western India. A new species was isolated from a warm spring near Lake Bogoria, Kenya and was characterised by light and electron microscopy and phylogenetically using the 16S rRNA gene, beta and alpha subunits including intergenic spacer (cpcBA–IGS) and 16S–23S internal transcribed spacer (ITS). The aquatic habitat of the new material from Kenya revealed a wider distribution of members of this genus. The new taxon was found to be closest to Desertifilum tharense (Oscillatoriales). The separation of the new species described here as D. fontinale sp. nov., using conventional and molecular traits, was based on differences in phenotypic features, 16S–23S ITS sequence and habitat.
Does the potentially toxic cyanobacterium Microcystis exist in the soda lakes of East Africa?
(Springer, 2011) Kotut, Kiplagat; Krienitz, L.
Presently, the food chains of the famous saline alkaline flamingo-lakes of East Africa are the focus of intense scientific discussion as the lakes host toxic cyanobacteria, which when consumed by Lesser Flamingos, weaken the birds and therefore make them susceptible to attacks by infective diseases. The distribution, genetic and toxicological aspects of Microcystis in Kenya has been studied extensively. Although there are reports on the occurrence of Microcystis in Kenya’s hypersaline alkaline lakes, they have not been confirmed. Our investigations carried out over a 10-year period in about 50 inland waters showed that Microcystis occurs exclusively in freshwaters, but never in the hypersaline alkaline lakes. Microscopic examinations of the phytoplankton of these lakes revealed the presence of Anabaenopsis abijatae (Nostococales) whose lumpy structure makes it roughly similar to Microcystis when viewed under an inverted microscope. We conclude that the possible occurrence of Microcystis in hypersaline alkaline lakes is doubtful and, as such, confirmatory studies including microphotographic documentation of findings should be carried out.
Fluctuating algal food populations and the occurrence of lesser flamingos (Phoeniconaias minor) in three Kenyan rift valley lakes
(2010-06) Krienitz, L.; Kotut, Kiplagat
The last two decades have witnessed increasing episodes of lesser flamingo die-offs in East Africa. Based on data on phytoplankton composition, biomass, and flamingo population density in three alkaline-saline lakes of Kenya (Bogoria, Nakuru, and Oloidien) in 2001–2010, this study explored the link between sudden flamingo deaths and fluctuations in algal food quantity and quality. The phytoplankton biomass ranged from 13 to 768 mg Æ L)1. Similarly, flamingo numbers varied widely from <1,000 to >500,000 individuals in the study lakes. The dominance of the cyanobacterium Arthrospira fusiformis (Woron.) Koma´rek et J. W. G. Lund was interrupted at irregular intervals in each lake and replaced partly by populations of different species of the nostocalean Anabaenopsis or by the picoplanktonic chlorophyte Picocystis salinarum Lewin. The populations of Anabaenopsis have the potential of blocking the flamingo food filtration system with their large and slimy colonies; moreover, they are able to produce cyanotoxins. Estimates of flamingo populations suggest that low flamingo numbers coincided with periods of low algal food quantity and ⁄ or poor quality. A food deficit can be theorized to have two effects on the flamingos: (i) it weakens them to the point of being susceptible to attacks of infective diseases, such as the ones caused by Mycobacterium avium and Pseudomonas aeruginosa, and (ii) it predisposes them to poisoning by cyanotoxins and pollutants, by reducing their capacity to handle toxic substances. This study therefore concludes that the challenges facing the flamingos are associated with changes in their environment, which affect food and water supply.
Food algae for Lesser Flamingos: a stocktaking
(Springer, 2016-07) Krienitz, Lothar; Krienitz, Doris; Dadheech, Pawan K.; Hübener, Thomas; Kotut, Kiplagat; Luo, Wei; Teubner, Katrin; Versfeld, Wilferd D.
Lesser Flamingo, the flagship species of saline wetlands of Africa and India, is a specialised feeder subsisting on microscopic cyanobacteria and algae. To establish the relationship between flamingo occurrence and food algal abundance and quality, an extensive microphyte survey in more than 150 sampling trips to seven countries over a 15-years period (2001–2015) was carried out. The 44 habitat sites included the core soda lakes in eastern Africa (Bogoria, Nakuru, Elmentaita, Oloidien), where the highest numbers of flamingos were observed, and five breeding sites in eastern and southern Africa as well as in north-western India. A reference describing the diversity of microphytes was established including members of three orders of cyanobacteria and nine orders of eukaryotic algae that potentially could act as food source for Lesser Flamingos. Preferred food organisms consisted of filamentous cyanobacteria, mainly Arthrospira, as well as benthic diatoms. Further investigation on the suitability of other microphytes as alternative flamingo diet revealed the food potential of chlorophytes and euglenophytes. This paper discusses a phycological perspective in the feeding ecology of Lesser Flamingos. The survey findings can assist scientists and conservationists in evaluating the potential of wetlands to support flocks of this endangered bird.
From Shiny Shoes to Muddy Reality: Understanding How Meso-State Actors Negotiate the Implementation Gap in Participatory Forest Management
(Routledge, 2017-11) Kairu, Anne; Upton, Caroline; Huxham, Mark; Kotut, Kiplagat; Mbeche, Robert; Kairo, James
Recent research on participatory forest management (PFM) in the global south has highlighted the existence of a widespread “implementation gap” between the ambitious intent enshrined in legislation and the often partial, disappointing rollout of devolved forest governance on the ground. Here, through an ethnographic case study of forest officers (FOs) in Kenya, we draw on a framework of critical institutionalism to examine how key meso-level actors, or “interface bureaucrats,” negotiate and challenge this implementation gap in everyday forest governance. We go beyond consideration of institutional bricolage in isolation or as an aggregate category, to analyze how bricolage as aggregation, alteration, and/or articulation is variously driven, shaped, and constrained by FOs’ multiple accountabilities and agency. Our analysis highlights the locally specific, contingent, and mutually reinforcing nature of accountability, agency and bricolage, and their explanatory power in relation to the performance and nature of “actually existing” PFM.
From Shiny Shoes to Muddy Reality: Understanding How Meso-State Actors Negotiate the Implementation Gap in Participatory Forest Management
(Taylor and Francis Online, 2017-11) Kairu, Anne; Upton, C.; Huxham, M.; Kotut, Kiplagat; Mbeche, R.; Kairo, J.
Recent research on participatory forest management (PFM) in the global south has highlighted the existence of a widespread “implementation gap” between the ambitious intent enshrined in legislation and the often partial, disappointing rollout of devolved forest governance on the ground. Here, through an ethnographic case study of forest officers (FOs) in Kenya, we draw on a framework of critical institutionalism to examine how key meso-level actors, or “interface bureaucrats,” negotiate and challenge this implementation gap in everyday forest governance. We go beyond consideration of institutional bricolage in isolation or as an aggregate category, to analyze how bricolage as aggregation, alteration, and/or articulation is variously driven, shaped, and constrained by FOs’ multiple accountabilities and agency. Our analysis highlights the locally specific, contingent, and mutually reinforcing nature of accountability, agency and bricolage, and their explanatory power in relation to the performance and nature of “actually existing” PFM.
Genotypic diversity of Dictyosphaerium–morphospecies (Chlorellaceae, Trebouxiophyceae) in African inland waters, including the description of four new genera
(2012) Krienitz, L.; Bock, Christina; Kotut, Kiplagat; Pröschold, Thomas
Trebouxiophytes of the Dictyosphaerium–morphotype from inland waters of Africa were studied using a polyphasic approach of SSU and ITS rDNA phylogeny, secondary structure of the ITS and observations made with a light microscope. Although the morphological criteria for differentiating species and genera are scarce, the genetic diversity of these algae was very high. Based on our genetic analysis findings, we described four new genera containing five new species: Compactochlorella dohrmannii, Compactochlorella kochii, Kalenjinia gelatinosa, Marasphaerium gattermannii and Masaia oloidia. Diversity and distribution of Chlorella–related colonial chlorophytes in the tropical and temperate zones were compared and discussed.
Haloleptolyngbya alcalis gen. et sp. nov., a new filamentous cyanobacterium from the soda lake Nakuru, Kenya
(Springer, 2012) Dadheech, Pawan K.; Mahmoud, Huda; Kotut, Kiplagat; Krienitz, L.
The food web of the saline-alkaline Lake Nakuru is dominated by the cyanobacterium Arthrospira fusiformis as the primary producer and a huge population of Lesser Flamingos as direct consumers. However, the dense blooms of Arthrospira are not stable, and collapse irregularly and unpredictably. During such periods they are replaced by other algae or cyanobacteria. The wide fluctuation in the cyanobacterial and algal populations of Lake Nakuru has a great influence on food availability for Lesser Flamingos, and is therefore of high ecological importance. To support the descriptive work on these phenomena, we describe here a new cyanobacterial taxon from this soda lake: Haloleptolyngbya alcalis Dadheech, Mahmoud, Kotut et Krienitz gen. et sp. nov. The study was based on multilocus molecular analyses of 16S rRNA gene, 16S-23S internal transcribed spacer, partial sequences of beta and alpha subunits including intergenic spacer (cpcBA-IGS) of phycocyanin operon, phenotypic features using light microscopy, scanning electron microscopy, transmission electron microscopy, and ecology. The new taxon established a separate lineage within the family of Peudanabaenaceae (Oscillatoriales).
Hidden diversity of eukaryotic plankton in the soda lake Nakuru, Kenya, during a phase of low salinity revealed by a SSU rRNA gene clone library
(Springer, 2013) Luo, Wei; Kotut, Kiplagat; Krienitz, L.
A SSU rRNA gene clone library was constructed to establish the diversity of eukaryotic plankton in the African soda lake Nakuru during a phase of low salinity (9.7 ppt = hyposaline). Normally, the lake is mesosaline (up to 50 ppt) and its phytoplankton is dominated by few species of cyanobacteria, in particular Arthrospira fusiformis, which is the main food resource of Lesser Flamingos. Our study recovered a unique phytoplankton species composition characterized by a high diversity of monadoid and coccoid green algae. Out of 77 clones detected, 52 belonged to Chlorophyta. Many of the chlorophytes were transported from the catchment area into the lake through small seasonal rivers and an outflow of the Nakuru town sewage treatment plant. Other phylogenetic groups detected were Fungi, Cryptophyta, Jakobida, Alveolata, Stramenopiles, and Metazoa. Our findings reveal a hidden diversity, which would not have been detected by traditional observations.

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